International Conference on Computational Methods in Systems Biology 2025

9:00 - 10:00 (1h)

Chair: Sabine Pérès, Invited talk: Predicting metabolic interactions between multiple species from first principles - Jörg Stellling

https://cmsb2025.sciencesconf.org/data/program/keynote_stelling.pdf

10:00 - 10:30 (30min)

Chair Stefan Haar, Continuous and hybrid models session ---- Efficient stochastic simulation of gene regulatory networks using hybrid models of transcriptional bursting.

Mathilde Gaillard and Ulysse Herbach

10:30 - 11:00 (30min)

Coffee break

11:00 - 11:30 (30min)

Exploring Metastable Dynamics of Gene Regulatory Networks with ISOKANN.

Maryam Yousefian, Luca Donati, Alexander Sikorski, Marcus Weber and Susanna Röblitz

11:30 - 12:00 (30min)

Chair Linda Brodo, Rule-based models session ---- Reachability Analysis for Parametric Rule-Based Models.

Jerome Feret and Rebecca Ghidini

12:00 - 12:30 (30min)

A rule-based modeling approach for studying animal collectives: a case study of juvenile honeybee thermotaxis.

Matthieu Bouguéon, Tatjana Petrov and Albin Salazar

12:30 - 13:00 (30min)

A Formal Approach to Identify Structural Patterns in RNA.

Michele Loreti, Michela Quadrini, Matteo Scoccia and Luca Tesei

13:00 - 13:10 (10min)

Closing session

13:20 - 14:30 (1h10)

Lunch

23rd International Conference on Computational Methods in Systems Biology (CMSB 2025)

10-12 september 2025 Lyon (France)

Program